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You could do that, and it would probably increase your speeds, but by what? a few seconds? Booting off compact flash shouldn't be any slower really than booting off a hd, it makes up what it lacks with transfer speeds with the seek time. And Compact Flash has a limited Write/Erase life cycle. You can read from it how ever many times you want, but you can only write/erase it a certain number of times.
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