That's true. It will power up to check for bootable devices, but can be disabled. I also sell timers for this kind of thing.

The M2-ATX should work for the supply though. Why aren't you using that? Search ebay for AX3022 and you'll see what I'm using for mine right now. It has a very clean output and it's cheap. I have it set for 12.1V and it has never cut out and always stays cool.